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Oct 30

GradCuit: Credit-Assigned Gradient Flow Enables Robust and Interpretable Test-Time Latent Reasoning

Optimization-based latent reasoning improves large language model outputs by optimizing instance-specific continuous states at test time while keeping model parameters frozen. Existing methods, however, typically connect these states to the reasoning trajectory through decoded tokens, making sequence-level credit assignment indirect and obscuring how latent updates shape subsequent reasoning. We introduce GradCuit (gradient through circuit), which inserts optimizable latent states at a selected Transformer layer between the hidden representations of the prompt and the generated continuation. Causal self-attention provides every continuation-token log-probability with a differentiable path to every preceding latent state through the remaining Transformer blocks, enabling reward-weighted gradients from the entire continuation to be assigned directly to the latents. Across five instruction-tuned backbones, three reasoning benchmarks, and two answer formats, GradCuit achieves an average accuracy of 64.5%, outperforming chain-of-thought prompting by 6.6 percentage points and the strongest competing method by 2.4 points. GradCuit also demonstrates greater robustness: across seven learning-rate settings, it consistently outperforms LatentSeek while reducing the standard deviation of accuracy from 1.53 to 0.82, and even its random-walk variant remains competitive with LatentSeek. For interpretability, token-level gradient attribution reveals that latent influence concentrates on reasoning-connector tokens, while layer analysis identifies early-to-middle Transformer layers as the most effective optimization space. By directly optimizing internal reasoning from outcome feedback, GradCuit opens a new axis of robust and interpretable test-time scaling, where LLMs adapt how they reason rather than merely regenerate, sample, or rerank outputs.

  • 7 authors
·
Aug 2 3

Central Dogma Transformer II: An AI Microscope for Understanding Cellular Regulatory Mechanisms

Motivation: Interpretability is not optional in biology: understanding gene regulation requires models whose learned structure can be directly interrogated, not merely accurate predictors whose internals resist mapping onto regulatory relationships. We ask whether an architecture mirroring the central dogma yields attention and gradient maps that recover known regulatory elements and networks in inspectable form. Results: Central Dogma Transformer II (CDT-II) mirrors the central dogma in its architecture -- DNA self-attention, RNA self-attention, and DNA-to-RNA cross-attention -- requiring only genomic embeddings and raw per-cell expression. On K562 CRISPR interference (CRISPRi) data with five genes held out entirely, CDT-II predicts perturbation effects (per-gene mean r = 0.84), recovers the GFI1B regulatory network (6.6-fold enrichment, P = 3.5 x 10^-17), and concentrates cross-attention on ENCODE regulatory elements including CTCF sites (mean 7.67x across 28 target genes, P < 0.001). Gradient attribution predicts consequences of perturbing therapeutic targets (mean r = 0.82). For TFRC, target of the anti-TfR1 antibody PPMX-T003, it identifies erythrocyte-structure, iron-dependent DNA-synthesis and oxidative-stress genes, matching anemia and ferroptosis reported clinically and preclinically -- without clinical data as input. CDT-II acts as an AI microscope, surfacing clinically relevant regulatory structure from perturbation experiments alone. Availability: Source code is available at https://github.com/nobusama/CDT2. Pre-computed embeddings, training data, and model weights are available at https://huggingface.co/datasets/nobusama17/CDT2-data.

  • 1 authors
·
Sep 8

Leverage Is Not Reach: A Control-Window Law for Single-Neuron Steering in Language Models

Aligned language models gate behaviors such as refusal and language routing through sparse feed forward neurons, yet no theory predicts when a single neuron intervention controls a behavior coherently rather than collapsing the output. We develop a budget normalized control window framework for single neuron steering. A dose along one write direction reduces to one control coordinate: the alignment between the residual stream and the write, driven along a universal saturation curve in units of a coherence budget set by the residual norm divided by the write norm. Coherent control exists when a behavior trigger lies below the collapse ceiling. The same coordinate governs benign mode switches and refusal; the ceiling follows from weights and one generic forward pass, while triggers are measured at rollout. On fifteen held out neurons, the predicted ceiling has mean absolute error 0.14, about 0.07 in bulk layers, and the committed open or closed verdict holds on eleven against a ten of fifteen majority baseline. Closed cases expose three failure modes rather than violations: collapse before trigger, too little depth to propagate, or a normalization that caps how far one neuron can push. The law explains why local gradient attribution anti predicts control: true controllers write off the readout axis and carry a near zero first order gradient. A forward only contrastive screen made precise by the window recovers controllers that attribution misses. On refusal, the hardest case, intervention success is typed, not scalar: coherent bypass and strict actionable reach separate, so a neuron can flip refusal in fluent, on task text with no actionable content, and genuine actionable reach appears only for three of six audited Llama pivots and only at later rollout horizons. Single neuron steering is therefore a budgeted, typed audit of controllability rather than a fixed dose anecdote.

  • 1 authors
·
Jun 17

Do Input Gradients Highlight Discriminative Features?

Post-hoc gradient-based interpretability methods [Simonyan et al., 2013, Smilkov et al., 2017] that provide instance-specific explanations of model predictions are often based on assumption (A): magnitude of input gradients -- gradients of logits with respect to input -- noisily highlight discriminative task-relevant features. In this work, we test the validity of assumption (A) using a three-pronged approach. First, we develop an evaluation framework, DiffROAR, to test assumption (A) on four image classification benchmarks. Our results suggest that (i) input gradients of standard models (i.e., trained on original data) may grossly violate (A), whereas (ii) input gradients of adversarially robust models satisfy (A). Second, we introduce BlockMNIST, an MNIST-based semi-real dataset, that by design encodes a priori knowledge of discriminative features. Our analysis on BlockMNIST leverages this information to validate as well as characterize differences between input gradient attributions of standard and robust models. Finally, we theoretically prove that our empirical findings hold on a simplified version of the BlockMNIST dataset. Specifically, we prove that input gradients of standard one-hidden-layer MLPs trained on this dataset do not highlight instance-specific signal coordinates, thus grossly violating assumption (A). Our findings motivate the need to formalize and test common assumptions in interpretability in a falsifiable manner [Leavitt and Morcos, 2020]. We believe that the DiffROAR evaluation framework and BlockMNIST-based datasets can serve as sanity checks to audit instance-specific interpretability methods; code and data available at https://github.com/harshays/inputgradients.

  • 3 authors
·
Feb 25, 2021

GrAInS: Gradient-based Attribution for Inference-Time Steering of LLMs and VLMs

Inference-time steering methods offer a lightweight alternative to fine-tuning large language models (LLMs) and vision-language models (VLMs) by modifying internal activations at test time without updating model weights. However, most existing approaches rely on fixed, global intervention vectors, overlook the causal influence of individual input tokens, and fail to leverage informative gradients from the model's logits, particularly in multimodal settings where visual and textual inputs contribute unevenly. To address these limitations, we introduce GrAInS, an inference-time steering approach that operates across both language-only and vision-language models and tasks. GrAInS uses contrastive, gradient-based attribution via Integrated Gradients to identify the top-k most influential tokens, both positively and negatively attributed based on their contribution to preferred versus dispreferred outputs. These tokens are then used to construct directional steering vectors that capture semantic shifts from undesirable to desirable behavior. During inference, GrAInS adjusts hidden activations at transformer layers guided by token-level attribution signals, and normalizes activations to preserve representational scale. This enables fine-grained, interpretable, and modular control over model behavior, without retraining or auxiliary supervision. Empirically, GrAInS consistently outperforms both fine-tuning and existing steering baselines: it achieves a 13.22% accuracy gain on TruthfulQA using Llama-3.1-8B, reduces hallucination rates on MMHal-Bench from 0.624 to 0.514 with LLaVA-1.6-7B, and improves alignment win rates on SPA-VL by 8.11%, all while preserving the model's fluency and general capabilities.

  • 4 authors
·
Jul 23, 2025

Extract Free Dense Misalignment from CLIP

Recent vision-language foundation models still frequently produce outputs misaligned with their inputs, evidenced by object hallucination in captioning and prompt misalignment in the text-to-image generation model. Recent studies have explored methods for identifying misaligned elements, aiming not only to enhance interpretability but also to improve model performance. However, current approaches primarily rely on large foundation models in a zero-shot manner or fine-tuned models with human annotations, which limits scalability due to significant computational costs. This work proposes a novel approach, dubbed CLIP4DM, for detecting dense misalignments from pre-trained CLIP, specifically focusing on pinpointing misaligned words between image and text. We carefully revamp the gradient-based attribution computation method, enabling negative gradient of individual text tokens to indicate misalignment. We also propose F-CLIPScore, which aggregates misaligned attributions with a global alignment score. We evaluate our method on various dense misalignment detection benchmarks, covering various image and text domains and misalignment types. Our method demonstrates state-of-the-art performance among zero-shot models and competitive performance with fine-tuned models while maintaining superior efficiency. Our qualitative examples show that our method has a unique strength to detect entity-level objects, intangible objects, and attributes that can not be easily detected for existing works. We conduct ablation studies and analyses to highlight the strengths and limitations of our approach. Our code is publicly available at https://github.com/naver-ai/CLIP4DM.

  • 4 authors
·
Dec 24, 2024

GoodVibe: Security-by-Vibe for LLM-Based Code Generation

Large language models (LLMs) are increasingly used for code generation in fast, informal development workflows, often referred to as vibe coding, where speed and convenience are prioritized, and security requirements are rarely made explicit. In this setting, models frequently produce functionally correct but insecure code, creating a growing security risk. Existing approaches to improving code security rely on full-parameter fine-tuning or parameter-efficient adaptations, which are either costly and prone to catastrophic forgetting or operate at coarse granularity with limited interpretability and control. We present GoodVibe, a neuron-level framework for improving the security of code language models by default. GoodVibe is based on the key insight that security-relevant reasoning is localized to a small subset of neurons. We identify these neurons using gradient-based attribution from a supervised security task and perform neuron-selective fine-tuning that updates only this security-critical subspace. To further reduce training cost, we introduce activation-driven neuron clustering, enabling structured updates with minimal overhead. We evaluate GoodVibe on six LLMs across security-critical programming languages, including C++, Java, Swift, and Go. GoodVibe substantially improves the security of generated code while preserving general model utility, achieving up to a 2.5x improvement over base models, matching or exceeding full fine-tuning with over 4,700x fewer trainable parameters, and reducing training computation by more than 3.6x compared to the parameter-efficient baseline (LoRA). Our results demonstrate that neuron-level optimization offers an effective and scalable approach to securing code generation without sacrificing efficiency or generality.

How explainable are adversarially-robust CNNs?

Three important criteria of existing convolutional neural networks (CNNs) are (1) test-set accuracy; (2) out-of-distribution accuracy; and (3) explainability. While these criteria have been studied independently, their relationship is unknown. For example, do CNNs that have a stronger out-of-distribution performance have also stronger explainability? Furthermore, most prior feature-importance studies only evaluate methods on 2-3 common vanilla ImageNet-trained CNNs, leaving it unknown how these methods generalize to CNNs of other architectures and training algorithms. Here, we perform the first, large-scale evaluation of the relations of the three criteria using 9 feature-importance methods and 12 ImageNet-trained CNNs that are of 3 training algorithms and 5 CNN architectures. We find several important insights and recommendations for ML practitioners. First, adversarially robust CNNs have a higher explainability score on gradient-based attribution methods (but not CAM-based or perturbation-based methods). Second, AdvProp models, despite being highly accurate more than both vanilla and robust models alone, are not superior in explainability. Third, among 9 feature attribution methods tested, GradCAM and RISE are consistently the best methods. Fourth, Insertion and Deletion are biased towards vanilla and robust models respectively, due to their strong correlation with the confidence score distributions of a CNN. Fifth, we did not find a single CNN to be the best in all three criteria, which interestingly suggests that CNNs are harder to interpret as they become more accurate.

  • 4 authors
·
May 25, 2022

Multi-Modal Interpretability for Enhanced Localization in Vision-Language Models

Recent advances in vision-language models have significantly expanded the frontiers of automated image analysis. However, applying these models in safety-critical contexts remains challenging due to the complex relationships between objects, subtle visual cues, and the heightened demand for transparency and reliability. This paper presents the Multi-Modal Explainable Learning (MMEL) framework, designed to enhance the interpretability of vision-language models while maintaining high performance. Building upon prior work in gradient-based explanations for transformer architectures (Grad-eclip), MMEL introduces a novel Hierarchical Semantic Relationship Module that enhances model interpretability through multi-scale feature processing, adaptive attention weighting, and cross-modal alignment. Our approach processes features at multiple semantic levels to capture relationships between image regions at different granularities, applying learnable layer-specific weights to balance contributions across the model's depth. This results in more comprehensive visual explanations that highlight both primary objects and their contextual relationships with improved precision. Through extensive experiments on standard datasets, we demonstrate that by incorporating semantic relationship information into gradient-based attribution maps, MMEL produces more focused and contextually aware visualizations that better reflect how vision-language models process complex scenes. The MMEL framework generalizes across various domains, offering valuable insights into model decisions for applications requiring high interpretability and reliability.

  • 2 authors
·
Sep 17, 2025

Pando: Do Interpretability Methods Work When Models Won't Explain Themselves?

Mechanistic interpretability is often motivated for alignment auditing, where a model's verbal explanations can be absent, incomplete, or misleading. Yet many evaluations do not control whether black-box prompting alone can recover the target behavior, so apparent gains from white-box tools may reflect elicitation rather than internal signal; we call this the elicitation confounder. We introduce Pando, a model-organism benchmark that breaks this confound via an explanation axis: models are trained to produce either faithful explanations of the true rule, no explanation, or confident but unfaithful explanations of a disjoint distractor rule. Across 720 finetuned models implementing hidden decision-tree rules, agents predict held-out model decisions from 10 labeled query-response pairs, optionally augmented with one interpretability tool output. When explanations are faithful, black-box elicitation matches or exceeds all white-box methods; when explanations are absent or misleading, gradient-based attribution improves accuracy by 3-5 percentage points, and relevance patching, RelP, gives the largest gains, while logit lens, sparse autoencoders, and circuit tracing provide no reliable benefit. Variance decomposition suggests gradients track decision computation, which fields causally drive the output, whereas other readouts are dominated by task representation, biases toward field identity and value. We release all models, code, and evaluation infrastructure.

  • 5 authors
·
Apr 12

Explanation of Dynamic Physical Field Predictions using WassersteinGrad: Application to Autoregressive Weather Forecasting

As the demand to integrate Artificial Intelligence into high-stakes environments continues to grow, explaining the reasoning behind neural-network predictions has shifted from a theoretical curiosity to a strict operational requirement. Our work is motivated by the explanations of autoregressive neural predictions on dynamic physical fields, as in weather forecasting. Gradient-based feature attribution methods are widely used to explain the predictions on such data, in particular due to their scalability to high-dimensional inputs. It is also interesting to remark that gradient-based techniques such as SmoothGrad are now standard on images to robustify the explanations using pointwise averages of the attribution maps obtained from several noised inputs. Our goal is to efficiently adapt this aggregation strategy to dynamic physical fields. To do so, our first contribution is to identify a fundamental failure mode when averaging perturbed attribution maps on dynamic physical fields: stochastic input perturbations do not induce stationary amplitude noise in attribution maps, but instead cause a geometric displacement of the attributions. Consequently, pointwise averaging blurs these spatially misaligned features. To tackle this issue, we introduce WassersteinGrad, which extracts a geometric consensus of perturbed attribution maps by computing their entropic Wasserstein barycenter. The results, obtained on regional weather data and a meteorologist-validated neural model, demonstrate promising explainability properties of WassersteinGrad over gradient-based baselines across both single-step and autoregressive forecasting settings.

  • 4 authors
·
Apr 23

Explaining El Niño Forecasts with the Average Gradient Outer Product

An important and unresolved problem in the physical sciences is explaining the predictions made by neural networks. Several explainable artificial intelligence (XAI) methods have been proposed to address this problem, including gradient XAI, Integrated Gradients, and GradientSHAP. We evaluate the baseline XAI methods according to four scores: sensitivity (XAI patterns strongly affect predictions), attribution (XAI patterns reproduce the change in prediction relative to a baseline), robustness (XAI patterns remain stable for nearby inputs), and coherence (XAI patterns are spatially smooth). We also introduce a new method, average gradient outer product (AGOP) XAI, that uses global gradient information to identify an important direction for a specific input. We apply XAI to neural network predictions of the El Niño-Southern Oscillation (ENSO) based on data from the Zebiak-Cane model. AGOP XAI achieves the highest attribution, robustness, and coherence scores in the architecture and lead-time comparisons reported here. Its sensitivity is surpassed by gradient XAI, which is maximally sensitive by definition. Beyond diagnosing neural-network behavior, AGOP XAI can generate candidate hypotheses about physical mechanisms. The method highlights an equatorial thermocline-depth signal consistent with recharge oscillator physics, together with a southeastern-Pacific lobe that may be specific to the Zebiak-Cane model. Finally, we test the physical relevance of AGOP using optimized perturbations that move the Zebiak-Cane model along AGOP explanation coordinates. Such perturbations can suppress the selected extreme events or, from a near-neutral ensemble, generate strong El Niño or La Niña events 10 months later.

  • 3 authors
·
Sep 30

Data Attribution for Diffusion Models: Timestep-induced Bias in Influence Estimation

Data attribution methods trace model behavior back to its training dataset, offering an effective approach to better understand ''black-box'' neural networks. While prior research has established quantifiable links between model output and training data in diverse settings, interpreting diffusion model outputs in relation to training samples remains underexplored. In particular, diffusion models operate over a sequence of timesteps instead of instantaneous input-output relationships in previous contexts, posing a significant challenge to extend existing frameworks to diffusion models directly. Notably, we present Diffusion-TracIn that incorporates this temporal dynamics and observe that samples' loss gradient norms are highly dependent on timestep. This trend leads to a prominent bias in influence estimation, and is particularly noticeable for samples trained on large-norm-inducing timesteps, causing them to be generally influential. To mitigate this effect, we introduce Diffusion-ReTrac as a re-normalized adaptation that enables the retrieval of training samples more targeted to the test sample of interest, facilitating a localized measurement of influence and considerably more intuitive visualization. We demonstrate the efficacy of our approach through various evaluation metrics and auxiliary tasks, reducing the amount of generally influential samples to 1{3} of its original quantity.

  • 4 authors
·
Jan 17, 2024

Evaluating Explainable AI Attribution Methods in Neural Machine Translation via Attention-Guided Knowledge Distillation

The study of the attribution of input features to the output of neural network models is an active area of research. While numerous Explainable AI (XAI) techniques have been proposed to interpret these models, the systematic and automated evaluation of these methods in sequence-to-sequence (seq2seq) models is less explored. This paper introduces a new approach for evaluating explainability methods in transformer-based seq2seq models. We use teacher-derived attribution maps as a structured side signal to guide a student model, and quantify the utility of different attribution methods through the student's ability to simulate targets. Using the Inseq library, we extract attribution scores over source-target sequence pairs and inject these scores into the attention mechanism of a student transformer model under four composition operators (addition, multiplication, averaging, and replacement). Across three language pairs (de-en, fr-en, ar-en) and attributions from Marian-MT and mBART models, Attention, Value Zeroing, and Layer Gradient times Activation consistently yield the largest gains in BLEU (and corresponding improvements in chrF) relative to baselines. In contrast, other gradient-based methods (Saliency, Integrated Gradients, DeepLIFT, Input times Gradient, GradientShap) lead to smaller and less consistent improvements. These results suggest that different attribution methods capture distinct signals and that attention-derived attributions better capture alignment between source and target representations in seq2seq models. Finally, we introduce an Attributor transformer that, given a source-target pair, learns to reconstruct the teacher's attribution map. Our findings demonstrate that the more accurately the Attributor can reproduce attribution maps, the more useful an injection of those maps is for the downstream task. The source code can be found on GitHub.

  • 4 authors
·
Mar 10

Matryoshka attribution: Learning to attribute language model outputs to representations and weights

Attributing language model outputs to their internal computations is an open problem in interpretability. Existing methods, which use causal interventions, gradients, or learnable masks, either are infeasibly expensive or struggle to identify actual causally-important internal computations. We propose framing attribution as the problem of identifying nested subsets of internal components which minimise a downstream loss. To learn this task, we introduce Matryoshka Attribution (MAttr), a mask learning method that parametrises the mask with a simple differentiable sigmoid top-k operator. We supervise training over all sparsities simultaneously by randomising k over training, resulting in a learned ordering of components by attribution score. MAttr achieves number 1 on the official leaderboard of the Mechanistic Interpretability Benchmark (Mueller et al., 2025); our method identifies sparse and task-transferrable circuits across varying circuit bases. As a practical application, we show that MAttr can be trained with reinforcement learning to identify weight changes responsible for downstream behaviours in LLM finetuning. We train MAttr on refusal judge scores and find that restoring 1% of Llama 3.1 8B Instruct's weights to their base model state is sufficient to remove refusals while maintaining capabilities. We view MAttr as a successful formulation of interpretability into a learnable objective that we can tackle with gradient descent, and encourage future work along these lines.

  • 7 authors
·
Sep 21

Gradient-Based Model Fingerprinting for LLM Similarity Detection and Family Classification

As Large Language Models (LLMs) become integral software components in modern applications, unauthorized model derivations through fine-tuning, merging, and redistribution have emerged as critical software engineering challenges. Unlike traditional software where clone detection and license compliance are well-established, the LLM ecosystem lacks effective mechanisms to detect model lineage and enforce licensing agreements. This gap is particularly problematic when open-source model creators, such as Meta's LLaMA, require derivative works to maintain naming conventions for attribution, yet no technical means exist to verify compliance. To fill this gap, treating LLMs as software artifacts requiring provenance tracking, we present TensorGuard, a gradient-based fingerprinting framework for LLM similarity detection and family classification. Our approach extracts model-intrinsic behavioral signatures by analyzing gradient responses to random input perturbations across tensor layers, operating independently of training data, watermarks, or specific model formats. TensorGuard supports the widely-adopted safetensors format and constructs high-dimensional fingerprints through statistical analysis of gradient features. These fingerprints enable two complementary capabilities: direct pairwise similarity assessment between arbitrary models through distance computation, and systematic family classification of unknown models via the K-Means clustering algorithm with domain-informed centroid initialization using known base models. Experimental evaluation on 58 models comprising 8 base models and 50 derivatives across five model families (Llama, Qwen, Gemma, Phi, Mistral) demonstrates 94% classification accuracy under our centroid-initialized K-Means clustering.

  • 3 authors
·
Jul 2, 2025

WAGLE: Strategic Weight Attribution for Effective and Modular Unlearning in Large Language Models

The need for effective unlearning mechanisms in large language models (LLMs) is increasingly urgent, driven by the necessity to adhere to data regulations and foster ethical generative AI practices. Despite growing interest of LLM unlearning, much of the existing research has focused on varied unlearning method designs to boost effectiveness and efficiency. However, the inherent relationship between model weights and LLM unlearning has not been extensively examined. In this paper, we systematically explore how model weights interact with unlearning processes in LLMs and we design the weight attribution-guided LLM unlearning method, WAGLE, which unveils the interconnections between 'influence' of weights and 'influence' of data to forget and retain in LLM generation. By strategically guiding the LLM unlearning across different types of unlearning methods and tasks, WAGLE can erase the undesired content, while maintaining the performance of the original tasks. We refer to the weight attribution-guided LLM unlearning method as WAGLE, which unveils the interconnections between 'influence' of weights and 'influence' of data to forget and retain in LLM generation. Our extensive experiments show that WAGLE boosts unlearning performance across a range of LLM unlearning methods such as gradient difference and (negative) preference optimization, applications such as fictitious unlearning, malicious use prevention, and copyrighted information removal, and models including Zephyr-7b-beta and Llama2-7b. To the best of our knowledge, our work offers the first principled method for attributing and pinpointing the influential weights in enhancing LLM unlearning. It stands in contrast to previous methods that lack weight attribution and simpler weight attribution techniques.

  • 6 authors
·
Oct 22, 2024

ReAGent: Towards A Model-agnostic Feature Attribution Method for Generative Language Models

Feature attribution methods (FAs), such as gradients and attention, are widely employed approaches to derive the importance of all input features to the model predictions. Existing work in natural language processing has mostly focused on developing and testing FAs for encoder-only language models (LMs) in classification tasks. However, it is unknown if it is faithful to use these FAs for decoder-only models on text generation, due to the inherent differences between model architectures and task settings respectively. Moreover, previous work has demonstrated that there is no `one-wins-all' FA across models and tasks. This makes the selection of a FA computationally expensive for large LMs since input importance derivation often requires multiple forward and backward passes including gradient computations that might be prohibitive even with access to large compute. To address these issues, we present a model-agnostic FA for generative LMs called Recursive Attribution Generator (ReAGent). Our method updates the token importance distribution in a recursive manner. For each update, we compute the difference in the probability distribution over the vocabulary for predicting the next token between using the original input and using a modified version where a part of the input is replaced with RoBERTa predictions. Our intuition is that replacing an important token in the context should have resulted in a larger change in the model's confidence in predicting the token than replacing an unimportant token. Our method can be universally applied to any generative LM without accessing internal model weights or additional training and fine-tuning, as most other FAs require. We extensively compare the faithfulness of ReAGent with seven popular FAs across six decoder-only LMs of various sizes. The results show that our method consistently provides more faithful token importance distributions.

  • 2 authors
·
Feb 1, 2024

Forgetting That Sticks: Quantization-Permanent Unlearning via Circuit Attribution

Standard unlearning evaluations measure behavioral suppression in full precision, immediately after training, despite every deployed language model being quantized first. Recent work has shown that 4-bit post-training quantization can reverse machine unlearning; we show this is not a tuning artefact but a systematic dual failure: gradient-based methods that achieve meaningful forgetting lose it under compression, while methods that survive quantization barely change the model. Both failures trace to the same root cause: across all baselines, per-parameter updates lie 47-828x below the NF4 quantization bin width; updates diffused across billions of parameters cannot clear quantization bin boundaries, a consequence we formalize as a sparsity-permanence tradeoff. We present MANSU (Mechanistic-Aligned Null-Space Unlearning), which resolves both modes by combining causal circuit attribution to isolate the minimal forget-set subgraph, circuit-restricted null-space projection with a diagonal-Fisher retain bound, and a per-parameter magnitude floor guaranteeing quantization survival by construction. We additionally introduce Circuit Attribution Divergence (CAD), a mechanistic verification metric distinguishing structural erasure from behavioral suppression, a distinction existing metrics cannot make. Across multiple model families and hazard benchmarks, MANSU is the first method to jointly satisfy all four properties with margin on each (meaningful forgetting, retain preservation, non-positive PTQ gap, and structural erasure), while gradient-based baselines recover up to +0.05 accuracy under compression.

Lexsi Lexsi Labs
·
May 13 2

Interpreting Object-level Foundation Models via Visual Precision Search

Advances in multimodal pre-training have propelled object-level foundation models, such as Grounding DINO and Florence-2, in tasks like visual grounding and object detection. However, interpreting these models\' decisions has grown increasingly challenging. Existing interpretable attribution methods for object-level task interpretation have notable limitations: (1) gradient-based methods lack precise localization due to visual-textual fusion in foundation models, and (2) perturbation-based methods produce noisy saliency maps, limiting fine-grained interpretability. To address these, we propose a Visual Precision Search method that generates accurate attribution maps with fewer regions. Our method bypasses internal model parameters to overcome attribution issues from multimodal fusion, dividing inputs into sparse sub-regions and using consistency and collaboration scores to accurately identify critical decision-making regions. We also conducted a theoretical analysis of the boundary guarantees and scope of applicability of our method. Experiments on RefCOCO, MS COCO, and LVIS show our approach enhances object-level task interpretability over SOTA for Grounding DINO and Florence-2 across various evaluation metrics, with faithfulness gains of 23.7\%, 31.6\%, and 20.1\% on MS COCO, LVIS, and RefCOCO for Grounding DINO, and 102.9\% and 66.9\% on MS COCO and RefCOCO for Florence-2. Additionally, our method can interpret failures in visual grounding and object detection tasks, surpassing existing methods across multiple evaluation metrics. The code will be released at https://github.com/RuoyuChen10/VPS.

  • 8 authors
·
Nov 25, 2024

RelP: Faithful and Efficient Circuit Discovery via Relevance Patching

Activation patching is a standard method in mechanistic interpretability for localizing the components of a model responsible for specific behaviors, but it is computationally expensive to apply at scale. Attribution patching offers a faster, gradient-based approximation, yet suffers from noise and reduced reliability in deep, highly non-linear networks. In this work, we introduce Relevance Patching (RelP), which replaces the local gradients in attribution patching with propagation coefficients derived from Layer-wise Relevance Propagation (LRP). LRP propagates the network's output backward through the layers, redistributing relevance to lower-level components according to local propagation rules that ensure properties such as relevance conservation or improved signal-to-noise ratio. Like attribution patching, RelP requires only two forward passes and one backward pass, maintaining computational efficiency while improving faithfulness. We validate RelP across a range of models and tasks, showing that it more accurately approximates activation patching than standard attribution patching, particularly when analyzing residual stream and MLP outputs in the Indirect Object Identification (IOI) task. For instance, for MLP outputs in GPT-2 Large, attribution patching achieves a Pearson correlation of 0.006, whereas RelP reaches 0.956, highlighting the improvement offered by RelP. Additionally, we compare the faithfulness of sparse feature circuits identified by RelP and Integrated Gradients (IG), showing that RelP achieves comparable faithfulness without the extra computational cost associated with IG.

  • 4 authors
·
Aug 28, 2025

From Language Modeling to Instruction Following: Understanding the Behavior Shift in LLMs after Instruction Tuning

Large Language Models (LLMs) have achieved remarkable success, demonstrating powerful instruction-following capabilities across diverse tasks. Instruction fine-tuning is critical in enabling LLMs to align with user intentions and effectively follow instructions. In this work, we investigate how instruction fine-tuning modifies pre-trained models, focusing on two perspectives: instruction recognition and knowledge evolution. To study the behavior shift of LLMs, we employ a suite of local and global explanation methods, including a gradient-based approach for input-output attribution and techniques for interpreting patterns and concepts in self-attention and feed-forward layers. Our findings reveal three significant impacts of instruction fine-tuning: 1) It empowers LLMs to better recognize the instruction parts from user prompts, thereby facilitating high-quality response generation and addressing the ``lost-in-the-middle'' issue observed in pre-trained models; 2) It aligns the knowledge stored in feed-forward layers with user-oriented tasks, exhibiting minimal shifts across linguistic levels. 3) It facilitates the learning of word-word relations with instruction verbs through the self-attention mechanism, particularly in the lower and middle layers, indicating enhanced recognition of instruction words. These insights contribute to a deeper understanding of the behavior shifts in LLMs after instruction fine-tuning and lay the groundwork for future research aimed at interpreting and optimizing LLMs for various applications. We will release our code and data soon.

  • 7 authors
·
Sep 30, 2023

Progressive Training for Explainable Citation-Grounded Dialogue: Reducing Hallucination to Zero in English-Hindi LLMs

Knowledge-grounded dialogue systems aim to generate informative, contextually relevant responses by conditioning on external knowledge sources. However, most existing approaches focus exclusively on English, lack explicit citation mechanisms for verifying factual claims, and offer limited transparency into model decision-making. We present XKD-Dial, a progressive four-stage training pipeline for explainable, knowledge-grounded dialogue generation in a bilingual (English-Hindi) setting, comprising: (1) multilingual adaptation, (2) English dialogue SFT with citation grounding, (3) bilingual dialogue SFT, and (4) GRPO alignment with citation-aware rewards. We evaluate six models spanning encoder-decoder (250M-3B) and decoder-only (1B-7B) architectures at every pipeline stage. Our key contributions are: (i) three post-hoc explainability analyses - cross-attention alignment, Integrated Gradients attribution, and occlusion-based causal grounding - applied systematically across the training trajectory to reveal how citation behaviour is learned, not only whether it is learned; (ii) citation-grounded SFT reduces hallucination to 0.0% for encoder-decoder models from Stage 2 onward; (iii) the progressive pipeline prevents catastrophic forgetting while improving Hindi capabilities; (iv) smaller models match larger models on English after SFT; and (v) GRPO provides marginal improvement over well-designed SFT for structured citation tasks. We evaluate across six automatic metrics (BLEU, ROUGE, BERTScore, FactScore, Citation-F1, and hallucination rate).

  • 1 authors
·
Mar 19 2

Elucidating the Design Space of LM Data Attribution

Data attribution methods for Language Models (LMs) are typically evaluated using downstream tasks like fact retrieval. However, existing evaluations vary multiple dataset properties simultaneously, making it impossible to isolate exactly why an attribution algorithm fails. To diagnose these failures, we explore the design space of LLM data attribution, with a primary focus on evaluation. We introduce the Controlled Attribution Benchmark (CATT) for fact tracing, in which we fine-tune LLMs on entirely fictitious knowledge, providing unambiguous ground truth for attribution. This synthetic setup allows us to systematically alter one dataset configuration at a time, such as document redundancy and lexical distractors. With this configurable evaluation, we demonstrate that redundancy and distractors consistently degrade attribution performance. Rather than proposing a new estimator, we examine two design choices that are underexplored: the loss used to compute gradients and how per-token attribution scores are aggregated into a document score. We find that the true causal evidence within a training document is highly localized, but standard methods dilute this evidence into noise by averaging attribution scores across the entire document. We find that replacing standard cross-entropy loss gradients with the negative log-odds gradients surfaces the critical tokens from other uninformative ones. We can then aggregate only the top token scores to improve ground truth recall by 35 to 72 percentage points across multiple baselines on our diagnostic benchmark. The negative log-odds correction also generalizes to FTRACE-TREX, improving counterfactual retraining performance for every method we test, by up to 4.9x.

  • 5 authors
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Oct 28

Do RUL explanations hold up? Faithfulness and stability of attributions on C-MAPSS

Deep remaining-useful-life (RUL) models on NASA C-MAPSS are now routine, and so are heatmaps that colour sensors and timesteps. A heatmap that looks mechanical is not the same as an explanation an engineer can act on. We train three standard architectures - a 1D CNN, an LSTM, and a small Transformer encoder - on the official FD001 and FD003 splits with the piecewise RUL cap of 125 cycles and the official PHM08 asymmetric score. We then attach three attribution maps (Integrated Gradients, occlusion, last-layer attention) and evaluate them with the checks the XAI-for-PdM literature still under-reports: deletion/insertion faithfulness, Spearman stability under sensor-scale noise, agreement across training seeds, and cosine consistency inside RUL bins. Prediction error is a prerequisite, not the claim. The headline is which explanation method moves the RUL output when its top cells are removed, and which map survives a 5% input perturbation. Integrated Gradients and occlusion are similarly faithful on the LSTM; Transformer attention is cheap and temporally smooth but weakly faithful. All three maps are almost unchanged under 5% input noise, yet IG/occlusion agree only moderately across two LSTM seeds - stability to sensor jitter is not the same as stability to retraining. A secondary tabular check on the AI4I 2020 failure dataset shows the same deletion pattern for tree importances. We recommend occlusion or IG for any C-MAPSS-style report that will be read by a maintenance engineer, and we treat raw attention weights as a visualisation only.

  • 8 authors
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Oct 2

Fine-Grained Post-Training Quantization for Large Vision Language Models with Quantization-Aware Integrated Gradients

Large Vision Language Models (LVLMs) have achieved remarkable success in a range of downstream tasks that require multimodal interaction, but their capabilities come with substantial computational and memory overhead, which hinders practical deployment. Among numerous acceleration techniques, post-training quantization is a popular and effective strategy for reducing memory cost and accelerating inference. However, existing LVLM quantization methods typically measure token sensitivity at the modality level, which fails to capture the complex cross-token interactions and falls short in quantitatively measuring the quantization error at the token level. As tokens interact within the model, the distinction between modalities gradually diminishes, suggesting the need for fine-grained calibration. Inspired by axiomatic attribution in mechanistic interpretability, we introduce a fine-grained quantization strategy on Quantization-aware Integrated Gradients (QIG), which leverages integrated gradients to quantitatively evaluate token sensitivity and push the granularity from modality level to token level, reflecting both inter-modality and intra-modality dynamics. Extensive experiments on multiple LVLMs under both W4A8 and W3A16 settings show that our method improves accuracy across models and benchmarks with negligible latency overhead. For example, under 3-bit weight-only quantization, our method improves the average accuracy of LLaVA-onevision-7B by 1.60%, reducing the gap to its full-precision counterpart to only 1.33%. The code is available at https://github.com/ucas-xiang/QIG.

  • 9 authors
·
Mar 17

TIMING: Temporality-Aware Integrated Gradients for Time Series Explanation

Recent explainable artificial intelligence (XAI) methods for time series primarily estimate point-wise attribution magnitudes, while overlooking the directional impact on predictions, leading to suboptimal identification of significant points. Our analysis shows that conventional Integrated Gradients (IG) effectively capture critical points with both positive and negative impacts on predictions. However, current evaluation metrics fail to assess this capability, as they inadvertently cancel out opposing feature contributions. To address this limitation, we propose novel evaluation metrics-Cumulative Prediction Difference (CPD) and Cumulative Prediction Preservation (CPP)-to systematically assess whether attribution methods accurately identify significant positive and negative points in time series XAI. Under these metrics, conventional IG outperforms recent counterparts. However, directly applying IG to time series data may lead to suboptimal outcomes, as generated paths ignore temporal relationships and introduce out-of-distribution samples. To overcome these challenges, we introduce TIMING, which enhances IG by incorporating temporal awareness while maintaining its theoretical properties. Extensive experiments on synthetic and real-world time series benchmarks demonstrate that TIMING outperforms existing time series XAI baselines. Our code is available at https://github.com/drumpt/TIMING.

  • 3 authors
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Jun 4, 2025

Label-Efficient Time Series Classification at Scale: A Dual-Stream OSSE-LSTM with Counterfactual Attribution

Time series are produced continuously at enormous scale by industrial equipment, wearables, power grids, and clinical monitors, yet annotation remains manual, expensive, and expert-dependent. The binding constraint in large-scale time series analytics is therefore not data volume but label volume, and the question facing a practitioner is concrete: how many examples per class must be labeled before a classifier becomes usable? We study this question directly, in a regime where the label space is fixed and known in advance and the decision rule must be constructed from only K labeled examples per class. We propose Dual-Stream OSSE-LSTM, an episodic metric-learning framework that pairs an Omni-Scale CNN with Squeeze-and-Excitation recalibration, for multi-scale motif extraction without per-dataset kernel tuning, with a Bidirectional LSTM for global temporal context. The two streams are independently normalized and fused into a prototype-oriented embedding. Because decisions taken from a few labels must also be explainable, we introduce Counterfactual Integrated Gradients (C-IG), which attributes the prototype margin between target and opposing classes rather than an isolated classifier logit, and reuses the resulting maps as soft masks for test-time prototype refinement without updating the encoder. On 19 univariate UCR datasets, OSSE-LSTM attains the highest average accuracy and per-dataset win count at every support size, and its accuracy remains within a 0.36-point band (96.36-96.72%) across that range. Its weakest configuration still exceeding the best result any compared baseline achieves at any K (93.99%).

  • 6 authors
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Oct 1

Conceptualizing Suicidal Behavior: Utilizing Explanations of Predicted Outcomes to Analyze Longitudinal Social Media Data

The COVID-19 pandemic has escalated mental health crises worldwide, with social isolation and economic instability contributing to a rise in suicidal behavior. Suicide can result from social factors such as shame, abuse, abandonment, and mental health conditions like depression, Post-Traumatic Stress Disorder (PTSD), Attention-Deficit/Hyperactivity Disorder (ADHD), anxiety disorders, and bipolar disorders. As these conditions develop, signs of suicidal ideation may manifest in social media interactions. Analyzing social media data using artificial intelligence (AI) techniques can help identify patterns of suicidal behavior, providing invaluable insights for suicide prevention agencies, professionals, and broader community awareness initiatives. Machine learning algorithms for this purpose require large volumes of accurately labeled data. Previous research has not fully explored the potential of incorporating explanations in analyzing and labeling longitudinal social media data. In this study, we employed a model explanation method, Layer Integrated Gradients, on top of a fine-tuned state-of-the-art language model, to assign each token from Reddit users' posts an attribution score for predicting suicidal ideation. By extracting and analyzing attributions of tokens from the data, we propose a methodology for preliminary screening of social media posts for suicidal ideation without using large language models during inference.

  • 8 authors
·
Dec 13, 2023

Prompt Codebooks: Discrete Compositional Optimization for Language Model Instruction Refinement

Automatic prompt optimization (APO) has driven significant gains in LLM-based agentic workflows. However, existing methods treat each task's prompt as a monolithic, instance-blind string optimized through global edits, producing brittle updates and preventing the reuse of learned sub-behaviors. We propose Prompt Codebooks (PCO), a novel compositional prompt optimization framework that recasts APO as discrete learning over a finite vocabulary of natural-language instincts - atomic, reusable instruction units. PCO organizes prompt-construction knowledge in a discrete codebook and routes each input to a small subset of entries via an LLM-based encoder; a generator composes them into a prompt for the frozen target model; a critic emits a structured verdict that decomposes by attribution into per-variable textual gradients, jointly training the encoder, generator, and codebook under a language-valued min-max objective. The resulting routing is per-instance: different inputs in the same task receive different instinct compositions, a regime structurally inexpressible under instance-blind methods. Across six benchmarks on Qwen3-8B and LLaMA-3.1-8B, PCO improves over zero-shot by up to +30.36 points, surpasses the strongest prior baseline (GEPA) by +3.34 on HotpotQA and +1.11 in aggregate, and reduces deployed prompt length by up to 14.1x versus MIPROv2 and 3.0x versus GEPA using only K=16 instincts.

  • 3 authors
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May 26